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Volume 14, Issue 1
Winter 2008
Issue Cover
All Issues
ISSN 1064-5462
EISSN 1530-9185
In this Issue

Special Issue on Systems Biology

Editorial Introduction

Systems Biology and Artificial Life: Towards Predictive Modeling of Biological Systems
Jan T. Kim, Roland Eils
Artificial Life (2008) 14 (1): 1–2.
View articletitled, Systems Biology and Artificial Life: Towards Predictive Modeling of Biological Systems
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Articles

Construction of a Biological Tissue Model Based on a Single-Cell Model: A Computer Simulation of Metabolic Heterogeneity in the Liver Lobule
Hiroshi Ohno, Yasuhiro Naito, Hiromu Nakajima, Masaru Tomita
Artificial Life (2008) 14 (1): 3–28.
View articletitled, Construction of a Biological Tissue Model Based on a Single-Cell Model: A Computer Simulation of Metabolic Heterogeneity in the Liver Lobule
Supplementary data
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Comparative Study of Circadian Oscillatory Network Models of Drosophila
Yukino Ogawa, Kazuharu Arakawa, Kazunari Kaizu, Fumihiko Miyoshi, Yoichi Nakayama ...
Artificial Life (2008) 14 (1): 29–48.
View articletitled, Comparative Study of Circadian Oscillatory Network Models of <em>Drosophila</em>
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Exploring the Operational Characteristics of Inference Algorithms for Transcriptional Networks by Means of Synthetic Data
Koenraad Van Leemput, Tim Van den Bulcke, Thomas Dhollander, Bart De Moor, Kathleen Marchal ...
Artificial Life (2008) 14 (1): 49–63.
View articletitled, Exploring the Operational Characteristics of Inference Algorithms for Transcriptional Networks by Means of Synthetic Data
Supplementary data
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Constructing Gene Networks Using Variational Bayesian Variable Selection
Isabel M. Tienda-Luna, Yufang Yin, Yufei Huang, Diego P. Ruiz Padillo, Maria C. Carrion Perez ...
Artificial Life (2008) 14 (1): 65–79.
View articletitled, Constructing Gene Networks Using Variational Bayesian Variable Selection
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Algebraic Method for the Analysis of Signaling Crosstalk
Yoshiya Matsubara, Shinichi Kikuchi, Masahiro Sugimoto, Kotaro Oka, Masaru Tomita
Artificial Life (2008) 14 (1): 81–94.
View articletitled, Algebraic Method for the Analysis of Signaling Crosstalk
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A Model of the Quorum Sensing System in Vibrio fischeri Using P Systems
Francisco J. Romero-Campero, Mario J. Pérez-Jiménez
Artificial Life (2008) 14 (1): 95–109.
View articletitled, A Model of the Quorum Sensing System in <em>Vibrio fischeri</em> Using P Systems
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Phase Transitions and Bistability in Honeybee Foraging Dynamics
Andreas Loengarov, Valery Tereshko
Artificial Life (2008) 14 (1): 111–120.
View articletitled, Phase Transitions and Bistability in Honeybee Foraging Dynamics
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Bio-Logic: Gene Expression and the Laws of Combinatorial Logic
Maria J. Schilstra, Chrystopher L. Nehaniv
Artificial Life (2008) 14 (1): 121–133.
View articletitled, Bio-Logic: Gene Expression and the Laws of Combinatorial Logic
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Genetic Regulatory Network Models of Biological Clocks: Evolutionary History Matters
Johannes F. Knabe, Chrystopher L. Nehaniv, Maria J. Schilstra
Artificial Life (2008) 14 (1): 135–148.
View articletitled, Genetic Regulatory Network Models of Biological Clocks: Evolutionary History Matters
Supplementary data
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The Topology of the Protein Network Influences the Dynamics of Gene Order: From Systems Biology to a Systemic Understanding of Evolution
Carole Knibbe, Jean-Michel Fayard, Guillaume Beslon
Artificial Life (2008) 14 (1): 149–156.
View articletitled, The Topology of the Protein Network Influences the Dynamics of Gene Order: From Systems Biology to a Systemic Understanding of Evolution
Supplementary data
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