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Randall D. Beer
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Journal Articles
Publisher: Journals Gateway
Artificial Life (2020) 26 (1): 5–22.
Published: 01 April 2020
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Using a glider in the Game of Life cellular automaton as a toy model of minimal persistent individuals, this article explores how questions regarding the origin of life might be approached from the perspective of autopoiesis. Specifically, I examine how the density of gliders evolves over time from random initial conditions and then develop a statistical mechanics of gliders that explains this time evolution in terms of the processes of glider creation, persistence, and destruction that underlie it.
Journal Articles
Publisher: Journals Gateway
Artificial Life (2016) 22 (4): 499–517.
Published: 01 November 2016
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Emergent individuals are often characterized with respect to their viability : their ability to maintain themselves and persist in variable environments. As such individuals interact with an environment, they undergo sequences of structural changes that correspond to their ontogenies. Ultimately, individuals that adapt to their environment, and increase their chances of survival, persist. This article provides an initial step towards a more formal treatment of these concepts. A network of possible ontogenies is uncovered by subjecting a model protocell to sequential perturbations and mapping the resulting structural configurations. The analysis of this network reveals trends in how the protocell can move between configurations, how its morphology changes, and how the role of the environment varies throughout. Viability is defined as expected life span given an initial configuration. This leads to two notions of adaptivity: a local adaptivity that addresses how viability changes in plastic transitions, and a global adaptivity that looks at longer-term tendencies for increased viability. To demonstrate how different protocell-environment pairings produce different patterns of ontogenic change, we generate and analyze a second ontogenic network for the same protocell in a different environment. Finally, the mechanisms of a minimal adaptive transition are analyzed, and it is shown that these rely on distributed spatial processes rather than an explicit regulatory mechanism. The combination of this model and analytical techniques provides a foundation for studying the emergence of viability, ontogeny, and adaptivity in more biologically realistic systems.
Journal Articles
Publisher: Journals Gateway
Artificial Life (2016) 22 (2): 153–171.
Published: 01 May 2016
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We introduce a spatial model of concentration dynamics that supports the emergence of spatiotemporal inhomogeneities that engage in metabolism–boundary co-construction. These configurations exhibit disintegration following some perturbations, and self-repair in response to others. We define robustness as a viable configuration's tendency to return to its prior configuration in response to perturbations, and plasticity as a viable configuration's tendency to change to other viable configurations. These properties are demonstrated and quantified in the model, allowing us to map a space of viable configurations and their possible transitions. Combining robustness and plasticity provides a measure of viability as the average expected survival time under ongoing perturbation, and allows us to measure how viability is affected as the configuration undergoes transitions. The framework introduced here is independent of the specific model we used, and is applicable for quantifying robustness, plasticity, and viability in any computational model of artificial life that demonstrates the conditions for viability that we promote.
Journal Articles
Publisher: Journals Gateway
Artificial Life (2015) 21 (1): 1–19.
Published: 01 February 2015
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Maturana and Varela's concept of autopoiesis defines the essential organization of living systems and serves as a foundation for their biology of cognition and the enactive approach to cognitive science. As an initial step toward a more formal analysis of autopoiesis, this article investigates its application to the compact, recurrent spatiotemporal patterns that arise in Conway's Game-of-Life cellular automaton. In particular, we demonstrate how such entities can be formulated as self-constructing networks of interdependent processes that maintain their own boundaries. We then characterize the specific organizations of several such entities, suggest a way to simplify the descriptions of these organizations, and briefly consider the transformation of such organizations over time.
Journal Articles
Publisher: Journals Gateway
Artificial Life (2014) 20 (2): 183–206.
Published: 01 April 2014
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This article examines in some technical detail the application of Maturana and Varela's biology of cognition to a simple concrete model: a glider in the game of Life cellular automaton. By adopting an autopoietic perspective on a glider, the set of possible perturbations to it can be divided into destructive and nondestructive subsets. From a glider's reaction to each nondestructive perturbation, its cognitive domain is then mapped. In addition, the structure of a glider's possible knowledge of its immediate environment, and the way in which that knowledge is grounded in its constitution, are fully described. The notion of structural coupling is then explored by characterizing the paths of mutual perturbation that a glider and its environment can undergo. Finally, a simple example of a communicative interaction between two gliders is given. The article concludes with a discussion of the potential implications of this analysis for the enactive approach to cognition.
Journal Articles
Publisher: Journals Gateway
Artificial Life (2004) 10 (3): 309–326.
Published: 01 July 2004
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Maturana and Varela's notion of autopoiesis has the potential to transform the conceptual foundation of biology as well as the cognitive, behavioral, and brain sciences. In order to fully realize this potential, however, the concept of autopoiesis and its many consequences require significant further theoretical and empirical development. A crucial step in this direction is the formulation and analysis of models of autopoietic systems. This article sketches the beginnings of such a project by examining a glider from Conway's game of life in autopoietic terms. Such analyses can clarify some of the key ideas underlying autopoiesis and draw attention to some of the central open issues. This article also examines the relationship between an autopoietic perspective on cognition and recent work on dynamical approaches to the behavior and cognition of situated, embodied agents.