Skip Nav Destination
Close Modal
Update search
NARROW
Format
Journal
TocHeadingTitle
Date
Availability
1-2 of 2
António R. C. Paiva
Close
Follow your search
Access your saved searches in your account
Would you like to receive an alert when new items match your search?
Sort by
Journal Articles
Publisher: Journals Gateway
Neural Computation (2009) 21 (10): 2894–2930.
Published: 01 October 2009
FIGURES
| View All (11)
Abstract
View article
PDF
Many decoding algorithms for brain machine interfaces' (BMIs) estimate hand movement from binned spike rates, which do not fully exploit the resolution contained in spike timing and may exclude rich neural dynamics from the modeling. More recently, an adaptive filtering method based on a Bayesian approach to reconstruct the neural state from the observed spike times has been proposed. However, it assumes and propagates a gaussian distributed state posterior density, which in general is too restrictive. We have also proposed a sequential Monte Carlo estimation methodology to reconstruct the kinematic states directly from the multichannel spike trains. This letter presents a systematic testing of this algorithm in a simulated neural spike train decoding experiment and then in BMI data. Compared to a point-process adaptive filtering algorithm with a linear observation model and a gaussian approximation (the counterpart for point processes of the Kalman filter), our sequential Monte Carlo estimation methodology exploits a detailed encoding model (tuning function) derived for each neuron from training data. However, this added complexity is translated into higher performance with real data. To deal with the intrinsic spike randomness in online modeling, several synthetic spike trains are generated from the intensity function estimated from the neurons and utilized as extra model inputs in an attempt to decrease the variance in the kinematic predictions. The performance of the sequential Monte Carlo estimation methodology augmented with this synthetic spike input provides improved reconstruction, which raises interesting questions and helps explain the overall modeling requirements better.
Journal Articles
Publisher: Journals Gateway
Neural Computation (2009) 21 (2): 424–449.
Published: 01 February 2009
FIGURES
Abstract
View article
PDF
This letter presents a general framework based on reproducing kernel Hilbert spaces (RKHS) to mathematically describe and manipulate spike trains. The main idea is the definition of inner products to allow spike train signal processing from basic principles while incorporating their statistical description as point processes. Moreover, because many inner products can be formulated, a particular definition can be crafted to best fit an application. These ideas are illustrated by the definition of a number of spike train inner products. To further elicit the advantages of the RKHS framework, a family of these inner products, the cross-intensity (CI) kernels, is analyzed in detail. This inner product family encapsulates the statistical description from the conditional intensity functions of spike trains. The problem of their estimation is also addressed. The simplest of the spike train kernels in this family provide an interesting perspective to others' work, as will be demonstrated in terms of spike train distance measures. Finally, as an application example, the RKHS framework is used to derive a clustering algorithm for spike trains from simple principles.