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Mark A. Kramer
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Journal Articles
Publisher: Journals Gateway
Neural Computation (2024) 36 (8): 1643–1668.
Published: 19 July 2024
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Consistent observations across recording modalities, experiments, and neural systems find neural field spectra with 1/f-like scaling, eliciting many alternative theories to explain this universal phenomenon. We show that a general dynamical system with stochastic drive and minimal assumptions generates 1/f-like spectra consistent with the range of values observed in vivo without requiring a specific biological mechanism or collective critical behavior.
Journal Articles
Publisher: Journals Gateway
Neural Computation (2018) 30 (1): 125–148.
Published: 01 January 2018
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To understand neural activity, two broad categories of models exist: statistical and dynamical. While statistical models possess rigorous methods for parameter estimation and goodness-of-fit assessment, dynamical models provide mechanistic insight. In general, these two categories of models are separately applied; understanding the relationships between these modeling approaches remains an area of active research. In this letter, we examine this relationship using simulation. To do so, we first generate spike train data from a well-known dynamical model, the Izhikevich neuron, with a noisy input current. We then fit these spike train data with a statistical model (a generalized linear model, GLM, with multiplicative influences of past spiking). For different levels of noise, we show how the GLM captures both the deterministic features of the Izhikevich neuron and the variability driven by the noise. We conclude that the GLM captures essential features of the simulated spike trains, but for near-deterministic spike trains, goodness-of-fit analyses reveal that the model does not fit very well in a statistical sense; the essential random part of the GLM is not captured.
Journal Articles
Publisher: Journals Gateway
Neural Computation (2013) 25 (4): 901–921.
Published: 01 April 2013
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The instantaneous phase of neural rhythms is important to many neuroscience-related studies. In this letter, we show that the statistical sampling properties of three instantaneous phase estimators commonly employed to analyze neuroscience data share common features, allowing an analytical investigation into their behavior. These three phase estimators—the Hilbert, complex Morlet, and discrete Fourier transform—are each shown to maximize the likelihood of the data, assuming the observation of different neural signals. This connection, explored with the use of a geometric argument, is used to describe the bias and variance properties of each of the phase estimators, their temporal dependence, and the effect of model misspecification. This analysis suggests how prior knowledge about a rhythmic signal can be used to improve the accuracy of phase estimates.
Journal Articles
Publisher: Journals Gateway
Neural Computation (2011) 23 (9): 2209–2241.
Published: 01 September 2011
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The coherence between neural spike trains and local-field potential recordings, called spike-field coherence, is of key importance in many neuroscience studies. In this work, aside from questions of estimator performance, we demonstrate that theoretical spike-field coherence for a broad class of spiking models depends on the expected rate of spiking. This rate dependence confounds the phase locking of spike events to field-potential oscillations with overall neuron activity and is demonstrated analytically, for a large class of stochastic models, and in simulation. Finally, the relationship between the spike-field coherence and the intensity field coherence is detailed analytically. This latter quantity is independent of neuron firing rate and, under commonly found conditions, is proportional to the probability that a neuron spikes at a specific phase of field oscillation. Hence, intensity field coherence is a rate-independent measure and a candidate on which to base the appropriate statistical inference of spike field synchrony.