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Takahiro Omi
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Journal Articles
Publisher: Journals Gateway
Neural Computation (2013) 25 (4): 854–876.
Published: 01 April 2013
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In many cortical areas, neural spike trains do not follow a Poisson process. In this study, we investigate a possible benefit of non-Poisson spiking for information transmission by studying the minimal rate fluctuation that can be detected by a Bayesian estimator. The idea is that an inhomogeneous Poisson process may make it difficult for downstream decoders to resolve subtle changes in rate fluctuation, but by using a more regular non-Poisson process, the nervous system can make rate fluctuations easier to detect. We evaluate the degree to which regular firing reduces the rate fluctuation detection threshold. We find that the threshold for detection is reduced in proportion to the coefficient of variation of interspike intervals.
Journal Articles
Publisher: Journals Gateway
Neural Computation (2011) 23 (12): 3125–3144.
Published: 01 December 2011
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The time histogram is a fundamental tool for representing the inhomogeneous density of event occurrences such as neuronal firings. The shape of a histogram critically depends on the size of the bins that partition the time axis. In most neurophysiological studies, however, researchers have arbitrarily selected the bin size when analyzing fluctuations in neuronal activity. A rigorous method for selecting the appropriate bin size was recently derived so that the mean integrated squared error between the time histogram and the unknown underlying rate is minimized (Shimazaki & Shinomoto, 2007 ). This derivation assumes that spikes are independently drawn from a given rate. However, in practice, biological neurons express non-Poissonian features in their firing patterns, such that the spike occurrence depends on the preceding spikes, which inevitably deteriorate the optimization. In this letter, we revise the method for selecting the bin size by considering the possible non-Poissonian features. Improvement in the goodness of fit of the time histogram is assessed and confirmed by numerically simulated non-Poissonian spike trains derived from the given fluctuating rate. For some experimental data, the revised algorithm transforms the shape of the time histogram from the Poissonian optimization method.