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Kausar Abbas
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Journal Articles
Publisher: Journals Gateway
Network Neuroscience (2021) 5 (3): 646–665.
Published: 02 September 2021
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Modeling communication dynamics in the brain is a key challenge in network neuroscience. We present here a framework that combines two measurements for any system where different communication processes are taking place on top of a fixed structural topology: path processing score (PPS) estimates how much the brain signal has changed or has been transformed between any two brain regions (source and target); path broadcasting strength (PBS) estimates the propagation of the signal through edges adjacent to the path being assessed. We use PPS and PBS to explore communication dynamics in large-scale brain networks. We show that brain communication dynamics can be divided into three main “communication regimes” of information transfer: absent communication (no communication happening); relay communication (information is being transferred almost intact); and transducted communication (the information is being transformed). We use PBS to categorize brain regions based on the way they broadcast information. Subcortical regions are mainly direct broadcasters to multiple receivers; Temporal and frontal nodes mainly operate as broadcast relay brain stations; visual and somatomotor cortices act as multichannel transducted broadcasters. This work paves the way toward the field of brain network information theory by providing a principled methodology to explore communication dynamics in large-scale brain networks.
Includes: Supplementary data
Journal Articles
Publisher: Journals Gateway
Network Neuroscience (2021) 5 (3): 666–688.
Published: 02 September 2021
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The quantification of human brain functional (re)configurations across varying cognitive demands remains an unresolved topic. We propose that such functional configurations may be categorized into three different types: (a) network configural breadth, (b) task-to task transitional reconfiguration, and (c) within-task reconfiguration. Such functional reconfigurations are rather subtle at the whole-brain level. Hence, we propose a mesoscopic framework focused on functional networks (FNs) or communities to quantify functional (re)configurations. To do so, we introduce a 2D network morphospace that relies on two novel mesoscopic metrics, trapping efficiency (TE) and exit entropy (EE), which capture topology and integration of information within and between a reference set of FNs. We use this framework to quantify the network configural breadth across different tasks. We show that the metrics defining this morphospace can differentiate FNs, cognitive tasks, and subjects. We also show that network configural breadth significantly predicts behavioral measures, such as episodic memory, verbal episodic memory, fluid intelligence, and general intelligence. In essence, we put forth a framework to explore the cognitive space in a comprehensive manner, for each individual separately, and at different levels of granularity. This tool that can also quantify the FN reconfigurations that result from the brain switching between mental states. Author Summary Understanding and measuring the ways in which human brain connectivity changes to accommodate a broad range of cognitive and behavioral goals is an important undertaking. We put forth a mesoscopic framework that captures such changes by tracking the topology and integration of information within and between functional networks (FNs) of the brain. Canonically, when FNs are characterized, they are separated from the rest of the brain network. The two metrics proposed in this work, trapping efficiency and exit entropy, quantify the topological and information integration characteristics of FNs while they are still embedded in the overall brain network. Trapping efficiency measures the module’s ability to preserve an incoming signal from escaping its local topology, relative to its total exiting weights. Exit entropy measures the module’s communication preferences with other modules/networks using information theory. When these two metrics are plotted in a 2D graph as a function of different brain states (i.e., cognitive/behavioral tasks), the resulting morphospace characterizes the extent of network reconfiguration between tasks (functional reconfiguration), and the change when moving from rest to an externally engaged “task-positive” state (functional preconfiguration), to collectively define network configural breadth. We also show that these metrics are sensitive to subject, task, and functional network identities. Overall, this method is a promising approach to quantify how human brains adapt to a range of tasks, and potentially to help improve precision clinical neuroscience.
Includes: Supplementary data
Journal Articles
Publisher: Journals Gateway
Network Neuroscience (2020) 4 (3): 698–713.
Published: 01 July 2020
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The identifiability framework (𝕀 f ) has been shown to improve differential identifiability (reliability across-sessions and -sites, and differentiability across-subjects) of functional connectomes for a variety of fMRI tasks. But having a robust single session/subject functional connectome is just the starting point to subsequently assess network properties for characterizing properties of integration, segregation, and communicability, among others. Naturally, one wonders whether uncovering identifiability at the connectome level also uncovers identifiability on the derived network properties. This also raises the question of where to apply the 𝕀 f framework: on the connectivity data or directly on each network measurement? Our work answers these questions by exploring the differential identifiability profiles of network measures when 𝕀 f is applied (a) on the functional connectomes, and (b) directly on derived network measurements. Results show that improving across-session reliability of functional connectomes (FCs) also improves reliability of derived network measures. We also find that, for specific network properties, application of 𝕀 f directly on network properties is more effective. Finally, we discover that applying the framework, either way, increases task sensitivity of network properties. At a time when the neuroscientific community is focused on subject-level inferences, this framework is able to uncover FC fingerprints, which propagate to derived network properties. Author Summary Functional connectome (FC) fingerprinting recently became a topic of great interest in network neuroscience. We recently proposed a framework to improve brain fingerprint (i.e., identifiability) of FCs, which improves not only test-retest reliability but also the correlation of FCs with fluid intelligence. However, does this improvement in FC fingerprints propagate to the derived network measures? In this work we found that improving the fingerprint (differential identifiability) of the functional connectome also improves the “fingerprint” of its network properties. Furthermore, when using the identifiability framework on the network properties directly, certain network properties like search information and communicability add to the FC fingerprint. Finally, we show that enhancement of the fingerprint in the network measures, in a wide range of cognitive tasks, using the identifiability framework also improves task sensitivity in these measures. We show that regardless of whether you are using functional connectomes or the network properties derived from them, using the 𝕀 f framework on the functional connectomes would be a beneficial first step.