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Table 1.

Summary of references for applications of AGRNs.

Problem	AGRN representations
Problem	ODEs	RBN	Bit strings
Dynamics analysis	[30] [31] [91] [100] [107] [127]	[1] [27] [37] [44] [83] [84] [85] [110] [131]	[5] [6] [18] [93] [96] [117] [119]
Morphogenesis	[13] [15] [28] [38] [39] [41] [42] [47] [48] [51] [73] [74] [75] [76] [126] [138]	[20] [36]	[90]
Agent control	[4] [63] [73] [74] [77] [91] [125] [149]		[112] [113] [137] [139]
Neuromodulation	[29] [64]
Indirect encoding	[147] [148]		[7] [105] [139]

Problem	AGRN representations
Problem	ODEs	RBN	Bit strings
Dynamics analysis	[30] [31] [91] [100] [107] [127]	[1] [27] [37] [44] [83] [84] [85] [110] [131]	[5] [6] [18] [93] [96] [117] [119]
Morphogenesis	[13] [15] [28] [38] [39] [41] [42] [47] [48] [51] [73] [74] [75] [76] [126] [138]	[20] [36]	[90]
Agent control	[4] [63] [73] [74] [77] [91] [125] [149]		[112] [113] [137] [139]
Neuromodulation	[29] [64]
Indirect encoding	[147] [148]		[7] [105] [139]