Comparison of data sets and clusters generated by MCL and Leiden. med_cond refers to the median conductance of the clusters (e.g., the 134,094 clusters generate by MCL from the imm_1 data set)
| Data set . | num_nodes . | num_seed_nodes . | num_edges . | num_clusters . | med_cond . |
|---|---|---|---|---|---|
| imm_1_mcl | 2,163,683 | 147,015 | 6,846,323 | 134,094 | 0.741 |
| imm_1_leiden | 2,163,683 | 147,015 | 6,845,768 | 142,005 | 1.0 |
| imm_2_mcl | 2,358,152 | 85,673 | 7,079,790 | 84,215 | 0.705 |
| imm_2_leiden | 2,358,152 | 85,673 | 7,079,790 | 110,994 | 1.0 |
| eco_mcl | 4,662,774 | 419,310 | 19,918,316 | 337,503 | 0.838 |
| eco_leiden | 4,662,774 | 419,310 | 19,908,278 | 291,583 | 1.0 |
| Data set . | num_nodes . | num_seed_nodes . | num_edges . | num_clusters . | med_cond . |
|---|---|---|---|---|---|
| imm_1_mcl | 2,163,683 | 147,015 | 6,846,323 | 134,094 | 0.741 |
| imm_1_leiden | 2,163,683 | 147,015 | 6,845,768 | 142,005 | 1.0 |
| imm_2_mcl | 2,358,152 | 85,673 | 7,079,790 | 84,215 | 0.705 |
| imm_2_leiden | 2,358,152 | 85,673 | 7,079,790 | 110,994 | 1.0 |
| eco_mcl | 4,662,774 | 419,310 | 19,918,316 | 337,503 | 0.838 |
| eco_leiden | 4,662,774 | 419,310 | 19,908,278 | 291,583 | 1.0 |